You're better off leaving regions as-is and not complicating your codebase with too many templates. A few templates should suffice for most designs and the page.tpl.php template will be reused in most circumstances. Only create new tpl.php files when you have a definite need not met by the existing markup.

Carl Wiedemann
Website design & development consulting | c4rl.ws
carl.wiedemann@gmail.com | skype: c4rlww