I'm having a problem, I think with pathauto. I have a nav bar that I built from book pages. I'm displaying that navbar in a nice menu. Before I was using a nice menu I was using some custom code in a block to generate the menu, and I was having the same problem there, as well. So I don't think this is related to nice menus.
The menu itself seems to have the correctly named paths, e.g.,
http://mydomain.com/article-title
This is what I see when I mouse over the items in admin/build/menu, anyway. But the menu itself is displaying strange paths, such as
http://mydomain.com/admin/build/path/node/1
Node 1 is the correct node, and obviously node/1 is a good path. But why isn't it using the alias, and why is it appending the path to the currently active path?
You can see this behavior at http://www.fertilityauthority.com, in the horizontal nav at the top of the page.
Any help would be greatly appreciated here, as this is a live site and it's only a matter of time before the client sees the problem.